EukCC is a command line too written in python3 to estimate completeness and contamination of novel eukaryotic MAGs.
Version 1 is deprecated
This is the documentation for version 2 of EukCC. This is not compatible with the now deprecated version 1. You can find the documentation for versions 0.2-version1 here: https://github.com/Finn-Lab/EukCC/tree/eukcc1/docs
Saary, Paul, Alex L. Mitchell, and Robert D. Finn. “Estimating the quality of eukaryotic genomes recovered from metagenomic analysis with EukCC.” Genome biology 21.1 (2020): 1-21.
The project is hosted on GitHub: https://github.com/Finn-Lab/EukCC/